Tokyo, Japan – Researchers at The University of Tokyo have used computational methods and analysis of recent experimental data to demonstrate that water molecules take two distinct structures in the liquid state. The team investigated the scattering of X-ray photons through water samples and showed a bimodal distribution hidden under the first diffraction peak that resulted from tetrahedral and non-tetrahedral arrangements of water molecules. This work may have important implications throughout science, but especially with regard to living systems, like proteins and cell structures, which are strongly affected by their surrounding water molecules.
Given the ubiquity of water on our planet and the central role it plays in all known life, it may be hard to believe that there is anything left to learn about this most familiar fluid. A simple molecule made up of just two hydrogen atoms and one oxygen; water still hides fundamental mysteries that remain to be unraveled. For example, water has unusually high melting and boiling points, and even expands when it freezes (unlike most liquids, which contract). These and other unusual properties make it very different from almost all other liquids, but also allow life as we know it to exist.
The weirdness of water can be best understood by thinking about the very unique interactions between H2O molecules–the hydrogen bond. Water tends to form four hydrogen bonds with its four neighbors, which leads to tetrahedral arrangements of the neighbors. Such arrangements can be largely distorted under thermal fluctuations. However, whether the distortion leads to the coexistence of distinct tetrahedral and non-tetrahedral arrangements has remained controversial.
Now, scientists at The University of Tokyo have combined computer simulations and the analysis of scattering experimental data to find the “structure factor” of water – the mathematical function that represents the paths of dispersed X-rays when they scatter off the hydrogen and oxygen atoms. The analysis showed two overlapping peaks hiding in the first diffraction peak of the structure factor. One of these peaks corresponded to the distance between oxygen atoms as in ordinary liquids, while the other indicated a longer distance, as in a tetrahedral arrangement. “The combination of new computational methods and analysis of recent X-ray scattering data allowed us to see what was not visible in previous work,” first author of the study Rui Shi explains.
This discovery may have huge implications across many scientific fields. Knowing the exact structural ordering of water is critical for a complete understanding of molecular biology, chemistry, and even many industrial applications. “It is very satisfying to be able to unravel the liquid structure of such a fundamental substance,” senior author Hajime Tanaka says.
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The work is published in the Journal of the American Chemical Society as “Direct Evidence in the Scattering Function for the Coexistence of Two Types of Local Structures in Liquid Water.” (DOI 10.1021/jacs.9b11211)
About Institute of Industrial Science (IIS), the University of Tokyo
Institute of Industrial Science (IIS), the University of Tokyo is one of the largest university-attached research institutes in Japan.
More than 120 research laboratories, each headed by a faculty member, comprise IIS, with more than 1,000 members including approximately 300 staff and 700 students actively engaged in education and research. Our activities cover almost all the areas of engineering disciplines. Since its foundation in 1949, IIS has worked to bridge the huge gaps that exist between academic disciplines and real-world applications.
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